STRINGSTRING
R2601_00995 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_00995" - Transcriptional regulator, GntR family protein in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_00995Transcriptional regulator, GntR family protein (232 aa)    
Predicted Functional Partners:
R2601_00985
D-mannonate oxidoreductase (486 aa)
        0.893
uxuA
D-mannonate hydro-lyase ; Catalyzes the dehydration of D-mannonate (404 aa)
 
          0.871
R2601_05778
Transcriptional regulator, GntR family protein (241 aa)
   
   
  0.787
R2601_05703
Regulatory protein GntR, HTH (222 aa)
   
          0.777
R2601_13274
Transcriptional regulator, GntR family protein (219 aa)
   
          0.769
R2601_06048
GntR family transcriptional regulator (201 aa)
   
          0.767
R2601_01000
TRAP dicarboxylate transporter, DctP subunit, putative (325 aa)
              0.745
R2601_01005
TRAP dicarboxylate transporter, DctQ subunit (166 aa)
 
          0.663
R2601_01658
Transcriptional regulator, GntR family protein (240 aa)
   
          0.630
R2601_17117
Transcriptional regulator, GntR family protein (216 aa)
   
          0.619
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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