STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAU47983.13-oxoacyl-(acyl-carrier-protein) reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). (271 aa)    
Predicted Functional Partners:
EAU45480.1
Non-ribosomal peptide synthase; COG3321 Polyketide synthase modules and related proteins.
  
 0.913
EAU45174.1
Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.
     
 0.777
EAU44425.1
Agropine synthesis reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
  0.777
EAU47984.1
COG0687 Spermidine/putrescine-binding periplasmic protein.
       0.773
EAU48594.1
3-oxoacyl-(acyl carrier protein) reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
     0.769
EAU47982.1
Hypothetical protein; COG2234 Predicted aminopeptidases.
   
  0.682
EAU47985.1
ABC transporter ATP-binding protein; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; Belongs to the ABC transporter superfamily.
       0.661
EAU47986.1
Polyamine ABC transporter (permease); COG1177 ABC-type spermidine/putrescine transport system, permease component II.
       0.661
EAU47987.1
ABC transporter permease protein; COG1176 ABC-type spermidine/putrescine transport system, permease component I.
       0.661
EAU46134.1
Agropine synthesis reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
 
  0.654
Your Current Organism:
Salipiger bermudensis
NCBI taxonomy Id: 314265
Other names: Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601, S. bermudensis HTCC2601, Salipiger bermudensis HTCC2601
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