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R2601_01105 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_01105" - C4-dicarboxylate transport system permease large protein in Pelagibaca bermudensis
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_01105C4-dicarboxylate transport system permease large protein (442 aa)    
Predicted Functional Partners:
R2601_01095
TRAP dicarboxylate transporter-DctP subunit (333 aa)
 
  0.996
R2601_01100
C4-dicarboxylate transport system permease small protein (162 aa)
 
   
    0.993
R2601_00590
C4-dicarboxylate transport system (C4-dicarboxylate-binding protein) (321 aa)
 
  0.964
R2601_00030
Putative ABC transporter periplasmic solute-binding protein (325 aa)
 
  0.964
R2601_06038
C4-dicarboxylate transport system C4-dicarboxylate-binding protein (322 aa)
 
  0.964
R2601_13314
Probable C4-dicarboxylate transport system, substrate-binding protein (333 aa)
 
  0.964
R2601_00875
Putative periplasmic binding protein (322 aa)
 
  0.964
R2601_03268
Dicarboxylate transporter DctP subunit family protein (322 aa)
 
  0.962
R2601_20351
TRAP-type C4-dicarboxylate transport system (342 aa)
 
  0.940
R2601_22227
TRAP-T family transporter, periplasmic binding protein, DctP (324 aa)
 
  0.935
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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