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R2601_01150 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_01150" - Probable transcriptional regulator protein, GntR family in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_01150Probable transcriptional regulator protein, GntR family (240 aa)    
Predicted Functional Partners:
R2601_01125
Uncharacterized protein (216 aa)
 
          0.864
R2601_01140
Putative oxidoreductase protein (346 aa)
 
          0.832
R2601_01145
Uncharacterized protein (594 aa)
              0.753
R2601_01130
Ribose ABC transporter, ATP-binding protein (515 aa)
   
        0.741
R2601_01135
Probable sugar ABC transporter permease protein (355 aa)
              0.741
R2601_06133
Transcriptional regulatory protein (229 aa)
   
          0.740
R2601_22232
Putative regulatory protein, GntR family (241 aa)
   
          0.738
R2601_00255
FAD linked oxidase (946 aa)
   
 
  0.733
R2601_02508
Transcriptional regulator, GntR family protein (236 aa)
   
          0.711
R2601_01120
Probable ABC transporter sugar-binding protein (315 aa)
 
          0.698
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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