STRINGSTRING
R2601_01320 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_01320" - Ureidoglycolate lyase in Pelagibaca bermudensis
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_01320Ureidoglycolate lyase (159 aa)    
Predicted Functional Partners:
R2601_01315
Polysaccharide deacetylase family protein (463 aa)
 
        0.967
R2601_01375
Uncharacterized protein (288 aa)
 
   
    0.957
R2601_01310
5-hydroxyisourate hydrolase (118 aa)
 
          0.887
R2601_17664
Serine--glyoxylate transaminase, putative (399 aa)
     
 
    0.879
R2601_01365
Serine--glyoxylate transaminase, putative (395 aa)
     
 
    0.879
R2601_13449
Urea amidohydrolase subunit beta (224 aa)
   
 
  0.851
R2601_01300
Uncharacterized protein (413 aa)
 
        0.848
ureA
Urea amidohydrolase subunit gamma (100 aa)
   
 
  0.847
glcB
Malate synthase G ; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA (715 aa)
 
 
    0.835
R2601_15150
2-hydroxyacid dehydrogenase (328 aa)
     
 
  0.816
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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