STRINGSTRING
R2601_01355 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_01355" - Threonine aldolase, low-specificity in Pelagibaca bermudensis
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
R2601_01355Threonine aldolase, low-specificity (387 aa)    
Predicted Functional Partners:
R2601_01360
Pyridoxal-phosphate dependent enzyme (321 aa)
 
   
    0.975
R2601_01365
Serine--glyoxylate transaminase, putative (395 aa)
 
   
    0.918
R2601_01345
Ornithine cyclodeaminase/mu-crystallin family protein (321 aa)
 
          0.917
R2601_18668
Putative sarcosine dehydrogenase protein (853 aa)
   
 
    0.818
R2601_11034
Threonine dehydratase (323 aa)
       
    0.768
R2601_17444
Oxidoreductase, FAD-binding protein (413 aa)
     
 
    0.756
R2601_26081
Putative aldehyde dehydrogenase transmembrane protein (507 aa)
     
 
    0.746
R2601_26746
Probable threonine dehydratase protein (338 aa)
       
    0.650
ilvA
Threonine deaminase ; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA (414 aa)
       
    0.650
R2601_01370
Transcriptional regulator, IclR family protein (280 aa)
 
          0.628
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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