STRINGSTRING
R2601_01573 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_01573" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_01573Uncharacterized protein (256 aa)    
Predicted Functional Partners:
R2601_01568
Uncharacterized protein (217 aa)
              0.796
R2601_01563
Ribose ABC transporter permease (335 aa)
              0.616
R2601_01558
ABC transporter related protein (816 aa)
              0.616
R2601_16335
Uncharacterized protein (557 aa)
         
  0.554
R2601_09210
Binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein (692 aa)
              0.552
R2601_13855
Metallo-beta-lactamase family protein (342 aa)
 
     
  0.531
R2601_22362
Phosphoadenylyl-sulfate reductase (thioredoxin) ; Reduction of activated sulfate into sulfite (263 aa)
   
        0.468
R2601_00175
Predicted oxidoreductase, Gfo/Idh/MocA family protein (374 aa)
 
          0.465
R2601_09245
Prolipoprotein diacylglyceryl transferase ; Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins (295 aa)
   
        0.462
R2601_07128
Prolipoprotein diacylglyceryl transferase ; Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins (306 aa)
   
        0.462
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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