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R2601_01593 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_01593" - Hypothetical LysR, Transcriptional regulator in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_01593Hypothetical LysR, Transcriptional regulator (295 aa)    
Predicted Functional Partners:
R2601_01588
Uncharacterized protein (165 aa)
 
          0.941
R2601_07688
Transcriptional regulatory protein (293 aa)
   
          0.730
R2601_00260
LysR-family transcriptional regulator (300 aa)
   
          0.712
R2601_00570
Transcriptional regulatory protein (308 aa)
   
          0.672
R2601_23590
Probable transcription regulator protein (296 aa)
   
          0.587
R2601_19899
Transcriptional regulator, LysR family protein (296 aa)
   
          0.578
R2601_12800
Transcriptional regulator, LysR family protein (306 aa)
   
          0.538
R2601_10564
Probable transcriptional regulator (291 aa)
   
          0.526
R2601_22512
Transcriptional regulator, LysR family protein (301 aa)
   
          0.510
R2601_16095
Uncharacterized protein (177 aa)
   
          0.502
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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