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R2601_01618 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_01618" - Transcriptional regulator, TetR family protein in Pelagibaca bermudensis
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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Experiments
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[Homology]
Score
R2601_01618Transcriptional regulator, TetR family protein (210 aa)    
Predicted Functional Partners:
R2601_01613
2,4-dienoyl-CoA reductase (NADPH) protein (678 aa)
 
          0.908
R2601_01628
Possible dioxygenase reductase subunit (362 aa)
 
          0.677
R2601_01623
Putative aromatic-ring hydroxylating dioxygenase, alpha-subunit (418 aa)
 
          0.637
R2601_09345
Uncharacterized protein (132 aa)
   
          0.472
R2601_18293
Uncharacterized protein (232 aa)
   
          0.436
R2601_10694
Uncharacterized protein (281 aa)
   
          0.428
hpbD
(4R)-4-hydroxyproline betaine 2-epimerase; Catalyzes the 2-epimerization of trans-4-hydroxy-L- proline betaine (tHyp-B) to cis-4-hydroxy-D-proline betaine (cHyp- B). Is involved in a catabolic pathway that degrades tHyp-B to alpha-ketoglutarate. This pathway would permit the utilization of tHyp-B as a carbon and nitrogen source in the absence of osmotic stress, since tHyp-B functions as an osmolyte and is not catabolized when it is needed as osmoprotectant. To a lesser extent, can also catalyze the racemization of L-proline betaine (367 aa)
 
          0.403
R2601_10879
Uncharacterized protein (71 aa)
   
          0.400
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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