STRINGSTRING
R2601_01633 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_01633" - Trimethylamine methyltransferase MttB-like protein in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_01633Trimethylamine methyltransferase MttB-like protein (490 aa)    
Predicted Functional Partners:
R2601_25191
Corrinoid methyltransferase protein, putative (234 aa)
 
   
  0.879
R2601_01613
2,4-dienoyl-CoA reductase (NADPH) protein (678 aa)
       
    0.859
R2601_25161
Uncharacterized protein (104 aa)
 
          0.788
R2601_25201
Uncharacterized protein (224 aa)
 
          0.787
R2601_23298
Uncharacterized metal-binding protein (678 aa)
 
          0.785
R2601_25176
Uncharacterized protein (353 aa)
 
          0.758
hpbD
(4R)-4-hydroxyproline betaine 2-epimerase; Catalyzes the 2-epimerization of trans-4-hydroxy-L- proline betaine (tHyp-B) to cis-4-hydroxy-D-proline betaine (cHyp- B). Is involved in a catabolic pathway that degrades tHyp-B to alpha-ketoglutarate. This pathway would permit the utilization of tHyp-B as a carbon and nitrogen source in the absence of osmotic stress, since tHyp-B functions as an osmolyte and is not catabolized when it is needed as osmoprotectant. To a lesser extent, can also catalyze the racemization of L-proline betaine (367 aa)
 
          0.738
R2601_17202
Uncharacterized protein (227 aa)
 
          0.708
R2601_01628
Possible dioxygenase reductase subunit (362 aa)
              0.583
R2601_01623
Putative aromatic-ring hydroxylating dioxygenase, alpha-subunit (418 aa)
              0.583
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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