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R2601_01668 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_01668" - ABC Glycine betaine/L-proline transporter, inner membrane subunit in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_01668ABC Glycine betaine/L-proline transporter, inner membrane subunit (328 aa)    
Predicted Functional Partners:
R2601_01663
ABC Glycine betaine/L-proline transporter, ATPase subunit (359 aa)
  0.999
R2601_01673
ABC Glycine betaine/L-proline transporter, periplasmic ligand binding protein (329 aa)
 
  0.999
R2601_20214
ABC glycine betaine/L-proline tranporter, ATPase subunit, ProV (340 aa)
  0.995
R2601_20224
ABC glycine betaine/L-proline transporter, periplasmic substrate-binding subunit (306 aa)
 
  0.991
R2601_05568
ABC transporter, periplasmic substrate-binding protein (301 aa)
 
 
    0.833
R2601_20219
ABC glycine betaine/L-proline transporter, inner membrane subunit (278 aa)
   
   
 
0.805
R2601_05578
ATP/GTP-binding site motif A (P-loop)-ABC transporter-AAA ATPase (311 aa)
 
   
  0.644
R2601_01678
Transcriptional regulator, AraC family protein (317 aa)
              0.633
R2601_01648
Aldehyde dehydrogenase (497 aa)
         
  0.605
R2601_01658
Transcriptional regulator, GntR family protein (240 aa)
              0.596
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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