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R2601_01678 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_01678" - Transcriptional regulator, AraC family protein in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_01678Transcriptional regulator, AraC family protein (317 aa)    
Predicted Functional Partners:
R2601_01673
ABC Glycine betaine/L-proline transporter, periplasmic ligand binding protein (329 aa)
              0.681
R2601_01668
ABC Glycine betaine/L-proline transporter, inner membrane subunit (328 aa)
              0.633
R2601_21411
AraC-type DNA-binding domain-containing protein (294 aa)
   
          0.619
R2601_01663
ABC Glycine betaine/L-proline transporter, ATPase subunit (359 aa)
              0.611
R2601_00730
Sarcosine oxidase, alpha subunit family protein (980 aa)
 
          0.585
R2601_01643
Oxidoreductase, NAD-binding site (440 aa)
 
          0.571
R2601_10189
Sarcosine oxidase, alpha subunit family protein (1012 aa)
 
          0.545
R2601_01688
Beta-lactamase-like protein (256 aa)
 
          0.537
R2601_10209
Sarcosine oxidase, beta subunit family protein (414 aa)
 
          0.512
R2601_10194
Sarcosine oxidase, delta subunit family protein (107 aa)
 
          0.510
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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