STRINGSTRING
R2601_01718 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_01718" - Dihydroxy-acid dehydratase in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_01718Dihydroxy-acid dehydratase (577 aa)    
Predicted Functional Partners:
ilvC
Alpha-keto-beta-hydroxylacyl reductoisomerase (340 aa)
 
  0.999
R2601_10939
Branched-chain amino acid aminotransferase (289 aa)
   
  0.996
leuA
Alpha-isopropylmalate synthase ; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) (521 aa)
 
 
  0.995
R2601_23775
2-isopropylmalate synthase (545 aa)
 
 
  0.994
R2601_14775
Uncharacterized protein (238 aa)
         
    0.975
R2601_21612
Acetolactate synthase (575 aa)
 
 
  0.973
R2601_14770
Putative IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase (298 aa)
   
  0.953
R2601_11224
Branched-chain amino acid aminotransferase (287 aa)
   
  0.953
R2601_23081
Acetolactate synthase, large subunit, putative (563 aa)
 
 
  0.950
R2601_14365
Uncharacterized protein (488 aa)
         
    0.950
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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