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R2601_01953 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_01953" - Putative ABC transporter, permease protein in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_01953Putative ABC transporter, permease protein (289 aa)    
Predicted Functional Partners:
R2601_01948
Branched amino acid ABC transporter (Permease) (327 aa)
 
  0.998
R2601_01943
ABC transporter ATP-binding protein (254 aa)
 
  0.995
R2601_20626
Branched amino acid ABC transporter (Permease) (291 aa)
 
  0.992
R2601_12710
Branched-chain amino acid ABC transporter, permease protein (358 aa)
 
  0.992
R2601_01938
Branched chain amino acid ABC transporter ATP-binding protein (239 aa)
 
  0.987
R2601_12725
Branched-chain amino acid ABC transporter, ATP-binding protein (288 aa)
 
  0.984
R2601_24819
Branched-chain amino acid ABC transporter, permease protein (429 aa)
 
 
  0.983
R2601_24829
Branched-chain amino acid ABC transporter, ATP-binding protein (274 aa)
 
  0.983
R2601_00650
ATP/GTP-binding site motif A (P-loop)-ABC transporter-AAA ATPase (234 aa)
 
  0.983
R2601_24834
Branched-chain amino acid ABC transporter, ATP-binding protein (256 aa)
 
  0.982
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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