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R2601_02013 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_02013" - Tryptophanyl-tRNA synthetase in Pelagibaca bermudensis
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_02013Tryptophanyl-tRNA synthetase (333 aa)    
Predicted Functional Partners:
pheT
Phenylalanyl-tRNA synthetase beta subunit (798 aa)
   
   
  0.887
serS
Seryl-tRNA(Ser/Sec) synthetase ; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) (430 aa)
   
 
  0.822
pheS
Phenylalanyl-tRNA synthetase alpha subunit (356 aa)
   
   
  0.748
argS
Arginyl-tRNA synthetase (580 aa)
   
   
  0.740
thrS
Threonyl-tRNA synthetase (649 aa)
   
   
  0.730
leuS
Leucyl-tRNA synthetase (856 aa)
   
   
  0.692
cysS
Cysteinyl-tRNA synthetase (461 aa)
   
   
  0.674
R2601_17374
Ribulose-phosphate 3-epimerase (233 aa)
   
   
  0.650
aroK
Shikimate kinase ; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate (192 aa)
   
   
  0.641
R2601_05638
Putative hypothetical Gifsy-1 prophage protein (138 aa)
   
          0.631
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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