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R2601_02043 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_02043" - Putative transporter, RarD family, DMT superfamily protein in Pelagibaca bermudensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_02043Putative transporter, RarD family, DMT superfamily protein (300 aa)    
Predicted Functional Partners:
R2601_12870
Uncharacterized protein (289 aa)
   
          0.777
R2601_24579
Uncharacterized protein (292 aa)
   
          0.768
R2601_02058
Probable iron ABC transporter, substrate-binding protein (339 aa)
              0.659
R2601_02053
Probable iron ABC transporter, permease protein (345 aa)
              0.657
R2601_02048
Probable iron ABC transporter, ATP-binding protein (254 aa)
              0.657
R2601_16525
Sulfurtransferase (285 aa)
              0.451
R2601_12273
Probable Rhodanese-related sulfurtransferase (313 aa)
              0.451
R2601_21927
Rieske (2Fe-2S) protein (356 aa)
              0.424
R2601_18658
Putative aromatic-ring hydroxylating dioxygenase, alpha-subunit (412 aa)
              0.424
R2601_11389
Rieske 2Fe-2S domain protein (374 aa)
              0.424
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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