STRINGSTRING
R2601_02218 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_02218" - Ferredoxin, 2Fe-2S in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_02218Ferredoxin, 2Fe-2S (107 aa)    
Predicted Functional Partners:
R2601_02213
FAD-dependent pyridine nucleotide-disulphide oxidoreductase (392 aa)
 
   
  0.968
R2601_02223
P-450 monoxygenase (391 aa)
 
 
  0.928
R2601_24140
Uncharacterized protein (150 aa)
   
  0.896
R2601_26881
Putative aminotransferase (344 aa)
 
  0.882
R2601_12975
Glutamate synthase, small subunit (478 aa)
     
  0.836
R2601_11836
Pyridine nucleotide-disulphide oxidoreductase family protein (426 aa)
     
  0.836
R2601_22417
Iron-sulfur cluster assembly accessory protein (126 aa)
   
 
  0.805
R2601_26076
Iron-sulfur cluster assembly family protein (107 aa)
   
 
  0.802
R2601_06648
Oxidoreductase, FAD-binding, putative (735 aa)
     
 
  0.795
R2601_11961
Pyridine nucleotide-disulphide oxidoreductase family protein (402 aa)
 
   
  0.778
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (15%) [HD]