STRINGSTRING
R2601_02238 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_02238" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_02238Uncharacterized protein (122 aa)    
Predicted Functional Partners:
R2601_02233
Probable oxidoreducatse protein (254 aa)
       
    0.908
R2601_02243
Putative transmembrane efflux protein (400 aa)
              0.805
glmM
Phosphoglucosamine mutase ; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate (447 aa)
   
  0.772
R2601_04738
Phosphoglucomutase/phosphomannomutase (457 aa)
   
  0.772
R2601_14345
Oxidoreductase, Gfo/Idh/MocA family protein (699 aa)
   
  0.755
R2601_15115
Undecaprenyl-phosphate galactosephosphotransferase (459 aa)
 
   
  0.702
R2601_10112
Uncharacterized protein (287 aa)
   
  0.679
R2601_06103
Putative NAD dependent epimerase/dehydratase (318 aa)
   
  0.679
R2601_03243
Uncharacterized protein (110 aa)
   
  0.679
R2601_24879
UDP-glucose pyrophosphorylase (303 aa)
     
  0.608
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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