STRINGSTRING
R2601_02328 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_02328" - Putative transcriptional regulator in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_02328Putative transcriptional regulator (301 aa)    
Predicted Functional Partners:
R2601_02333
TonB dependent, hydroxamate-type ferrisiderophore, outer membrane receptor (689 aa)
 
          0.857
R2601_02353
ABC multidrug efflux transporter, fused ATPase and inner membrane subunits (566 aa)
 
          0.688
R2601_00715
Transcription regulator (314 aa)
   
          0.665
R2601_01698
Putative transcriptional regulator protein (316 aa)
   
          0.623
R2601_02338
ABC transporter, substrate binding protein (Ferrichrome) (278 aa)
 
          0.612
R2601_03083
Transcriptional regulator, AraC family protein (313 aa)
   
          0.603
R2601_01863
Transcriptional regulator, AraC family protein (348 aa)
 
          0.601
R2601_02343
ABC Fe+3 hydroxamate (Ferrichrome) transporter, fused inner membrane subunits (645 aa)
 
          0.577
R2601_00110
Putative transcriptional regulator, lysR family protein (310 aa)
   
          0.564
R2601_02023
AraC family transcriptional regulator (340 aa)
   
          0.556
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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