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R2601_02618 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_02618" - Arsenite efflux pump, ACR3 family protein in Pelagibaca bermudensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_02618Arsenite efflux pump, ACR3 family protein (348 aa)    
Predicted Functional Partners:
R2601_02613
Transcriptional regulator, ArsR familyy protein (112 aa)
 
     
  0.867
R2601_02623
NADPH-dependent FMN reductase (237 aa)
         
  0.828
R2601_16835
Transcriptional regulator/arsenate reductase (264 aa)
 
     
  0.783
R2601_11534
Transcriptional regulator, ArsR family protein (104 aa)
 
     
  0.614
R2601_09350
Arsenate reductase (148 aa)
 
     
  0.576
R2601_11529
Permease, putative (340 aa)
 
          0.536
R2601_19185
Low molecular weight phosphotyrosine protein phosphatase (151 aa)
         
  0.515
R2601_09215
Thioredoxin reductase (334 aa)
   
        0.513
R2601_06848
Regulatory protein, ArsR (116 aa)
 
     
  0.484
R2601_23515
Periplasmic protein thiol-disulfide oxidoreductase, DsbE subfamily (188 aa)
   
   
  0.474
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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