STRINGSTRING
R2601_02648 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_02648" - Putative transcriptional regulator protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_02648Putative transcriptional regulator protein (323 aa)    
Predicted Functional Partners:
R2601_02633
Uncharacterized protein (296 aa)
 
   
  0.942
R2601_02643
Putative glycerol-3-phosphate dehydrogenase protein (564 aa)
 
   
  0.936
R2601_02638
Putative L-xylulose kinase protein (512 aa)
 
   
  0.929
R2601_02658
ABC transporter, nucleotide binding/ATPase protein (Sugar) (498 aa)
   
   
  0.899
R2601_02653
Putative sugar ABC transporter permease protein (333 aa)
 
   
  0.898
R2601_00860
Glycerone kinase (580 aa)
   
    0.839
R2601_02628
Short chain dehydrogenase (392 aa)
 
          0.833
R2601_02663
Putative ABC transporter periplasmic sugar-binding protein (347 aa)
 
          0.808
R2601_22412
Triose-phosphate isomerase ; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) (249 aa)
       
  0.652
R2601_00905
Triose-phosphate isomerase ; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) (261 aa)
       
  0.652
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (7%) [HD]