STRINGSTRING
R2601_02678 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_02678" - Uncharacterized protein in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_02678Uncharacterized protein (322 aa)    
Predicted Functional Partners:
pyrE
Orotate phosphoribosyltransferase ; Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) (226 aa)
     
      0.629
pyrF
OMP decarboxylase ; Catalyzes the decarboxylation of orotidine 5’- monophosphate (OMP) to uridine 5’-monophosphate (UMP) (235 aa)
     
      0.592
R2601_02673
Hydrophobe/amphiphile efflux-1 family protein (1053 aa)
              0.542
R2601_02668
Efflux transporter, RND family, MFP subunit (376 aa)
              0.542
guaA
Glutamine amidotransferase ; Catalyzes the synthesis of GMP from XMP (521 aa)
     
        0.528
R2601_13609
Hypothetical 132 kDa HIT-like protein in hisE 3’region (122 aa)
   
        0.525
R2601_09532
Uncharacterized protein (237 aa)
   
        0.500
R2601_02683
Permease of the major facilitator superfamily protein (386 aa)
              0.489
R2601_18553
Enoyl-CoA hydratase/isomerase-3-hydroxyacyl-CoA dehydrogenase, 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein (666 aa)
     
      0.487
R2601_17988
Enoyl-CoA hydratase (634 aa)
     
      0.487
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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