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R2601_03083 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_03083" - Transcriptional regulator, AraC family protein in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_03083Transcriptional regulator, AraC family protein (313 aa)    
Predicted Functional Partners:
R2601_03088
ABC transporter, membrane spanning protein (Sugar) (293 aa)
 
          0.711
R2601_03173
Polygalacturonase-like protein (167 aa)
 
          0.662
R2601_02328
Putative transcriptional regulator (301 aa)
   
          0.603
R2601_03158
ABC transporter, substrate binding protein (Sugar) (120 aa)
   
          0.573
R2601_02003
Transcriptional regulator, AraC family protein (294 aa)
   
          0.523
R2601_18648
Transcriptional regulator, AraC family protein (346 aa)
   
          0.513
kduI
DKI isomerase ; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate (375 aa)
   
          0.475
R2601_02863
Uncharacterized protein (110 aa)
   
          0.459
R2601_21411
AraC-type DNA-binding domain-containing protein (294 aa)
   
          0.457
R2601_00715
Transcription regulator (314 aa)
   
          0.451
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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