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R2601_03088 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_03088" - ABC transporter, membrane spanning protein in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_03088ABC transporter, membrane spanning protein (Sugar) (293 aa)    
Predicted Functional Partners:
R2601_03098
ABC transporter, membrane spanning protein (Sugar) (307 aa)
 
  0.997
R2601_03158
ABC transporter, substrate binding protein (Sugar) (120 aa)
 
 
  0.994
R2601_03118
ABC transporter, nucleotide binding/ATPase protein (Sugar) (370 aa)
   
  0.994
R2601_20521
Sn-glycerol-3-phosphate import ATP-binding protein UgpC ; Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Responsible for energy coupling to the transport system (357 aa)
  0.977
R2601_20526
Sn-glycerol-3-phosphate transport system permease protein UgpE ; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane (280 aa)
 
  0.952
R2601_00700
Sn-glycerol-3-phosphate transport system permease protein UgpE ; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane (278 aa)
 
  0.949
R2601_05553
ABC sugar transporter, inner membrane subunit (277 aa)
 
  0.940
R2601_09502
Putative integral membrane binding protein dependent transport protein (407 aa)
 
  0.938
R2601_05528
ABC sugar transporter, ATPase subunit (358 aa)
   
  0.934
R2601_09512
ABC transporter ATP-binding protein (341 aa)
   
  0.917
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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