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R2601_03098 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_03098" - ABC transporter, membrane spanning protein in Pelagibaca bermudensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_03098ABC transporter, membrane spanning protein (Sugar) (307 aa)    
Predicted Functional Partners:
R2601_03088
ABC transporter, membrane spanning protein (Sugar) (293 aa)
 
  0.997
R2601_03158
ABC transporter, substrate binding protein (Sugar) (120 aa)
 
 
  0.992
R2601_03118
ABC transporter, nucleotide binding/ATPase protein (Sugar) (370 aa)
   
  0.991
R2601_20521
Sn-glycerol-3-phosphate import ATP-binding protein UgpC ; Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Responsible for energy coupling to the transport system (357 aa)
  0.953
R2601_05548
ABC sugar transporter, inner membrane subunit (307 aa)
 
  0.924
R2601_20531
ABC transporter, membrane spanning protein (Sn-Glycerol-3-phosphate) (323 aa)
 
 
  0.905
R2601_00695
ABC sugar transporter, inner membrane subunit (293 aa)
 
  0.903
R2601_24644
ABC alpha-glucoside transporter, inner membrane subunit AglF (324 aa)
 
 
  0.899
R2601_09497
Putative integral membrane binding protein dependent transport protein (413 aa)
 
  0.892
R2601_05528
ABC sugar transporter, ATPase subunit (358 aa)
   
  0.853
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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