STRINGSTRING
R2601_03203 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_03203" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_03203Uncharacterized protein (237 aa)    
Predicted Functional Partners:
R2601_03208
Uncharacterized protein (378 aa)
 
 
    0.979
R2601_03243
Uncharacterized protein (110 aa)
 
 
    0.926
R2601_03218
Putative 5-dehydro-4-deoxyglucarate dehydratase (155 aa)
 
        0.903
R2601_14345
Oxidoreductase, Gfo/Idh/MocA family protein (699 aa)
   
 
    0.823
R2601_21957
Xanthine dehydrogenase family protein, small/large subunits (905 aa)
       
  0.822
R2601_02998
Isomerase/lactonizing enzyme (382 aa)
 
 
    0.730
R2601_12585
Oxidoreductase, aldo/keto reductase family protein (346 aa)
       
    0.660
R2601_08711
Aldo/keto reductase (330 aa)
       
    0.660
R2601_03068
Transcriptional regulator, GntR family protein (147 aa)
 
          0.642
R2601_07658
Amidase (420 aa)
   
   
    0.642
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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