STRINGSTRING
R2601_03208 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_03208" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_03208Uncharacterized protein (378 aa)    
Predicted Functional Partners:
R2601_03218
Putative 5-dehydro-4-deoxyglucarate dehydratase (155 aa)
 
 
  0.991
R2601_03203
Uncharacterized protein (237 aa)
 
 
    0.979
R2601_05323
2-keto-3-deoxy-galactonokinase (319 aa)
 
 
  0.907
R2601_18850
2-dehydro-3-deoxygalactonokinase, putative (276 aa)
 
 
  0.902
R2601_26546
Mannitol dehydrogenase (497 aa)
 
 
    0.889
R2601_00985
D-mannonate oxidoreductase (486 aa)
 
 
    0.888
R2601_22252
Altronate hydrolase (498 aa)
 
 
  0.885
R2601_03288
2-deoxy-D-gluconate 3-dehydrogenase (247 aa)
 
   
    0.808
R2601_12615
3-oxoadipate enol-lactone hydrolase (262 aa)
 
 
  0.734
R2601_13139
3-oxoadipate enol-lactone hydrolase (262 aa)
 
 
  0.729
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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