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R2601_03288 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_03288" - 2-deoxy-D-gluconate 3-dehydrogenase in Pelagibaca bermudensis
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
R2601_032882-deoxy-D-gluconate 3-dehydrogenase (247 aa)    
Predicted Functional Partners:
kduI
DKI isomerase ; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate (375 aa)
 
  0.996
fabZ
Beta-hydroxyacyl-ACP dehydratase ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs (153 aa)
 
  0.925
R2601_18553
Enoyl-CoA hydratase/isomerase-3-hydroxyacyl-CoA dehydrogenase, 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein (666 aa)
   
 
  0.906
R2601_17988
Enoyl-CoA hydratase (634 aa)
   
 
  0.906
R2601_22681
2-dehydro-3-deoxygluconokinase (308 aa)
   
 
  0.893
R2601_00910
Ribose-5-phosphate isomerase B (153 aa)
       
  0.887
R2601_22252
Altronate hydrolase (498 aa)
 
   
  0.884
uxuA
D-mannonate hydro-lyase ; Catalyzes the dehydration of D-mannonate (404 aa)
 
   
  0.872
R2601_08796
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase ; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl- ACP to E-(2)-decenoyl-ACP and then its isomerization to Z-(3)- decenoyl-ACP. Can catalyze the dehydratase reaction for beta- hydroxyacyl-ACPs with saturated chain lengths up to 16-0, being most active on intermediate chain length (169 aa)
   
  0.870
R2601_22242
Putative Zn-dependent dehydrogenase (334 aa)
 
 
  0.867
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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