STRINGSTRING
R2601_03318 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_03318" - Response Regulator Receiver Signal Transduction Histidine Kinase in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_03318Response Regulator Receiver Signal Transduction Histidine Kinase (130 aa)    
Predicted Functional Partners:
R2601_09405
Chemotaxis response regulator, CheY1 (124 aa)
  0.973
R2601_08371
Dihydrolipoamide acetyltransferase (461 aa)
   
  0.968
R2601_24944
Phosphate regulon transcriptional regulatory protein PhoB (229 aa)
  0.963
R2601_00155
Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain (222 aa)
  0.949
R2601_10949
DNA-binding response regulator PetR (233 aa)
 
  0.947
R2601_16885
DNA-binding response regulator ChvI (233 aa)
  0.945
R2601_04818
Two-component system, regulatory protein (226 aa)
 
  0.944
R2601_01828
Probable two-component response regulator (244 aa)
 
  0.938
R2601_23830
DNA-binding response regulator CtrA (179 aa)
 
  0.938
R2601_06988
DNA-binding response regulator (240 aa)
  0.937
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (9%) [HD]