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R2601_03393 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_03393" - Possible TrapT family, dctP subunit, C4-dicarboxylate periplasmic binding protein in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_03393Possible TrapT family, dctP subunit, C4-dicarboxylate periplasmic binding protein (369 aa)    
Predicted Functional Partners:
R2601_03353
Putative transmembrane protein (395 aa)
 
 
  0.899
R2601_23625
TRAP-type C4-dicarboxylate transport system, large permease component (426 aa)
 
 
  0.899
R2601_03803
TrapT family, dctM subunit, C4-dicarboxylate transport (396 aa)
 
 
  0.897
R2601_03883
TRAP-T family transporter, DctM (12 TMs) subunit (246 aa)
 
 
  0.895
R2601_13174
TRAP-T family transporter, DctM (12 TMs) subunit (426 aa)
 
 
  0.892
R2601_20376
Uncharacterized protein (463 aa)
 
 
  0.892
R2601_02198
TRAP transporter, DctM subunit (432 aa)
 
 
  0.887
R2601_05348
TRAP transporter, DctM subunit (430 aa)
 
 
  0.880
R2601_06113
Uncharacterized protein (433 aa)
 
 
  0.873
R2601_19939
Uncharacterized protein (430 aa)
 
 
  0.859
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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