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R2601_03438 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_03438" - 3-oxoacyl-(Acyl carrier protein) reductase in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_034383-oxoacyl-(Acyl carrier protein) reductase (128 aa)    
Predicted Functional Partners:
R2601_01050
3-oxoacyl-(Acyl-carrier-protein) reductase (271 aa)
   
          0.774
R2601_06178
Uncharacterized protein (258 aa)
   
          0.772
R2601_01773
3-ketoacyl-(Acyl-carrier-protein) reductase (256 aa)
   
          0.770
R2601_03493
Short-chain alcohol dehydrogenase (242 aa)
   
          0.766
R2601_11114
7-alpha-hydroxysteroid dehydrogenase, putative (266 aa)
   
          0.761
R2601_08511
D-beta-hydroxybutyrate dehydrogenase (248 aa)
   
          0.731
R2601_03613
Short-chain dehydrogenase/reductase SDR (244 aa)
   
          0.719
R2601_09887
Oxidoreductase, short chain dehydrogenase/reductase family protein (252 aa)
   
          0.698
R2601_04113
Beta-ketoacyl reductase (262 aa)
   
          0.648
R2601_23148
Agropine synthesis reductase (238 aa)
   
          0.618
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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