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R2601_03568 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_03568" - Putative shikimate 5-dehydrogenase in Pelagibaca bermudensis
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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Score
R2601_03568Putative shikimate 5-dehydrogenase (238 aa)    
Predicted Functional Partners:
aroK
Shikimate kinase ; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate (192 aa)
  0.959
aroB
3-dehydroquinate synthase (370 aa)
 
 
  0.923
aroQ
Type II DHQase ; Catalyzes a trans-dehydration via an enolate intermediate (147 aa)
   
 
  0.901
aroC
5-enolpyruvylshikimate-3-phosphate phospholyase ; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system (366 aa)
 
  0.900
R2601_12990
Glutamate synthase, large subunit (1537 aa)
   
 
  0.855
aroA
5-enolpyruvylshikimate-3-phosphate synthase ; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate (447 aa)
 
 
  0.810
aroE
Shikimate dehydrogenase (NADP(+)) ; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) (276 aa)
   
   
 
0.798
R2601_15447
DNA polymerase I (935 aa)
         
  0.766
R2601_00850
Putative transketolase beta subunit protein (344 aa)
 
          0.759
R2601_16380
Chorismate mutase (101 aa)
   
  0.720
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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