STRINGSTRING
R2601_03598 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_03598" - Aminoglycoside phosphotransferase in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_03598Aminoglycoside phosphotransferase (239 aa)    
Predicted Functional Partners:
R2601_03603
Acyl-CoA dehydrogenase (327 aa)
 
    0.971
R2601_17988
Enoyl-CoA hydratase (634 aa)
 
 
    0.939
R2601_18553
Enoyl-CoA hydratase/isomerase-3-hydroxyacyl-CoA dehydrogenase, 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein (666 aa)
 
 
    0.913
R2601_03593
Transcriptional regulator (253 aa)
              0.859
R2601_17774
Phosphoglycerate mutase family protein (217 aa)
 
        0.785
R2601_20971
Oxidoreductase, zinc-binding dehydrogenase family protein (278 aa)
 
        0.751
R2601_04113
Beta-ketoacyl reductase (262 aa)
 
          0.729
R2601_25261
Enoyl-CoA hydratase/isomerase family protein (258 aa)
   
 
    0.692
R2601_02553
Carnitinyl-CoA dehydratase (260 aa)
   
 
    0.689
R2601_25681
Enoyl-CoA hydratase (261 aa)
   
 
    0.663
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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