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R2601_03793 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_03793" - Carbon-monoxide dehydrogenase medium chain in Pelagibaca bermudensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_03793Carbon-monoxide dehydrogenase medium chain (316 aa)    
Predicted Functional Partners:
R2601_21957
Xanthine dehydrogenase family protein, small/large subunits (905 aa)
  0.999
R2601_03783
Xanthine dehydrogenase family protein, small subunit (159 aa)
  0.977
R2601_01225
Probable carbon monoxide dehydrogenase large chain (793 aa)
  0.973
R2601_01230
Putative oxidoreductase protein (166 aa)
  0.973
R2601_26431
Putative carbon-monoxide dehydrogenase small chain (161 aa)
  0.970
R2601_03763
Xanthine dehydrogenase family protein, large subunit (66 aa)
 
  0.960
R2601_25716
Ferredoxin (173 aa)
  0.957
R2601_08843
Xanthine dehydrogenase family protein, large subunit (763 aa)
  0.955
R2601_02293
Probable oxidoreductase (726 aa)
  0.951
R2601_02303
Probable oxidoreductase (213 aa)
  0.949
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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