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R2601_04708 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_04708" - Endo-1,3-1,4-beta-glycanase in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_04708Endo-1,3-1,4-beta-glycanase (611 aa)    
Predicted Functional Partners:
groS
Protein Cpn10 ; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter (97 aa)
       
      0.566
R2601_04683
Glucosyltransferase protein (341 aa)
 
          0.521
R2601_01503
ABC transporter, substrate binding protein (Oligopeptide) (547 aa)
   
          0.471
R2601_26051
Beta-N-acetylhexosaminidase (335 aa)
       
  0.446
R2601_03083
Transcriptional regulator, AraC family protein (313 aa)
   
          0.436
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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