STRINGSTRING
R2601_04883 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_04883" - ParB-like partition protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_04883ParB-like partition protein (326 aa)    
Predicted Functional Partners:
R2601_04888
ATPase, ParA type (391 aa)
 
 
  0.987
R2601_06913
RepA partitioning protein/ATPase, ParA type (402 aa)
 
 
  0.914
R2601_00325
ATPase, ParA type (391 aa)
 
 
  0.914
R2601_04878
Replication initiator RepC (354 aa)
 
     
  0.882
R2601_06588
RepA partitioning protein/ATPase, ParA type (381 aa)
 
 
  0.866
guaA
Glutamine amidotransferase ; Catalyzes the synthesis of GMP from XMP (521 aa)
       
  0.835
R2601_23318
Inosine-5’-monophosphate dehydrogenase (482 aa)
       
    0.821
R2601_06903
Replication initiator RepC (404 aa)
 
     
  0.790
R2601_00315
Replication protein C (355 aa)
 
     
  0.790
R2601_00795
Replication protein (434 aa)
 
 
  0.734
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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