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R2601_05208 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_05208" - Carboxynorspermidine/carboxyspermidine decarboxylase in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
R2601_05208Carboxynorspermidine/carboxyspermidine decarboxylase ; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine (376 aa)    
Predicted Functional Partners:
R2601_05213
Saccharopine dehydrogenase family protein (417 aa)
 
 
  0.981
dapF
Diaminopimelate epimerase ; Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan (279 aa)
   
 
  0.886
R2601_12990
Glutamate synthase, large subunit (1537 aa)
         
  0.838
R2601_17913
Aspartokinase (412 aa)
   
  0.832
R2601_07871
Aspartate kinase (463 aa)
   
  0.832
asd
Aspartate-beta-semialdehyde dehydrogenase ; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate (340 aa)
   
 
  0.741
R2601_20951
Uncharacterized protein (185 aa)
   
  0.739
R2601_14770
Putative IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase (298 aa)
   
  0.739
R2601_12523
Aminotransferase class IV , putative D-alanine aminotransferase (287 aa)
   
  0.739
R2601_11224
Branched-chain amino acid aminotransferase (287 aa)
   
  0.739
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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