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R2601_05213 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_05213" - Saccharopine dehydrogenase family protein in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
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Databases
Textmining
[Homology]
Score
R2601_05213Saccharopine dehydrogenase family protein (417 aa)    
Predicted Functional Partners:
R2601_05208
Carboxynorspermidine/carboxyspermidine decarboxylase ; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine (376 aa)
 
 
  0.981
lysA
Diaminopimelate decarboxylase ; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine (421 aa)
   
 
  0.860
R2601_24295
Agmatinase (272 aa)
       
  0.794
R2601_17559
Putative agmatinase (332 aa)
       
  0.794
R2601_23308
Agmatinase, putative (326 aa)
       
  0.769
R2601_10017
Predicted Orn/Lys/Arg decarboxylase (762 aa)
       
  0.766
R2601_08848
Putative Ornithine decarboxylase (375 aa)
   
 
  0.737
argD
Acetylornithine aminotransferase (398 aa)
   
  0.724
R2601_02313
Arginase (309 aa)
       
  0.668
asd
Aspartate-beta-semialdehyde dehydrogenase ; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate (340 aa)
     
 
  0.657
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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