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R2601_05218 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_05218" - Putative GntR-family transcription regulator in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_05218Putative GntR-family transcription regulator (218 aa)    
Predicted Functional Partners:
R2601_05223
Uncharacterized protein (328 aa)
 
          0.907
R2601_05228
Uncharacterized protein (200 aa)
 
          0.805
R2601_05233
Uncharacterized protein (438 aa)
 
          0.785
R2601_05533
Transcriptional regulator, GntR family protein (233 aa)
   
          0.763
R2601_01743
Transcriptional regulatory protein (235 aa)
   
          0.753
R2601_00005
Transcriptional regulator, GntR family protein (81 aa)
   
          0.748
R2601_05238
Uncharacterized protein (415 aa)
 
          0.727
R2601_18985
Bifunctional protein PutA ; Oxidizes proline to glutamate for use as a carbon and nitrogen source (1142 aa)
   
        0.600
R2601_05243
Malonyl-CoA synthase (499 aa)
 
     
  0.594
R2601_19065
Putative decarboxylase (416 aa)
 
          0.530
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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