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R2601_05273 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_05273" - ABC sugar in Pelagibaca bermudensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_05273ABC sugar (Glycerol) transporter, inner membrane subunit (287 aa)    
Predicted Functional Partners:
R2601_05278
ABC sugar (Glycerol) transporter, inner membrane subunit (289 aa)
 
  0.987
R2601_05263
ABC sugar (Glycerol) transporter, periplasmic binding protein (574 aa)
 
 
  0.983
R2601_05283
ABC sugar (Glycerol) transporter, ATPase subunit (358 aa)
 
   
  0.980
R2601_05288
ABC sugar (Glycerol) transporter, ATPase subunit (362 aa)
 
   
  0.980
R2601_05268
Uncharacterized protein (91 aa)
 
          0.929
R2601_20521
Sn-glycerol-3-phosphate import ATP-binding protein UgpC ; Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Responsible for energy coupling to the transport system (357 aa)
 
  0.923
R2601_05548
ABC sugar transporter, inner membrane subunit (307 aa)
 
  0.918
R2601_09497
Putative integral membrane binding protein dependent transport protein (413 aa)
 
  0.892
R2601_03088
ABC transporter, membrane spanning protein (Sugar) (293 aa)
 
 
  0.770
R2601_26526
ABC sorbitol/mannitol transporter, inner membrane subunit (276 aa)
 
  0.768
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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