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R2601_05308 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_05308" - TRAP dicarboxylate family transporter, DctQ subunit in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_05308TRAP dicarboxylate family transporter, DctQ subunit (186 aa)    
Predicted Functional Partners:
R2601_05303
TRAP dicarboxylate transporter, DctM subunit (438 aa)
   
    0.998
R2601_05313
TRAP dicarboxylate family transporter, DctP subunit (347 aa)
   
    0.998
R2601_01738
TRAP dicarboxylate family transporter, DctP subunit (340 aa)
   
    0.941
R2601_05358
Possible TrapT family, dctQ subunit, C4-dicarboxylate transport (161 aa)
         
    0.900
R2601_05348
TRAP transporter, DctM subunit (430 aa)
 
     
    0.900
R2601_01728
TRAP dicarboxylate transporter, DctM subunit (438 aa)
   
    0.860
R2601_05298
Dihydroxy-acid dehydratase (598 aa)
 
          0.851
R2601_25426
Putative C4-dicarboxylate transporter family protein, DctM subunit (475 aa)
   
    0.751
R2601_01260
TRAP transporter, DctM subunit (436 aa)
   
    0.686
R2601_25416
Extracellular solute-binding protein, family 7 ; Part of the tripartite ATP-independent periplasmic (TRAP) transport system (353 aa)
   
    0.683
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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