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R2601_05348 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_05348" - TRAP transporter, DctM subunit in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_05348TRAP transporter, DctM subunit (430 aa)    
Predicted Functional Partners:
R2601_05358
Possible TrapT family, dctQ subunit, C4-dicarboxylate transport (161 aa)
       
    0.955
R2601_00590
C4-dicarboxylate transport system (C4-dicarboxylate-binding protein) (321 aa)
 
  0.948
R2601_00030
Putative ABC transporter periplasmic solute-binding protein (325 aa)
 
  0.946
R2601_05353
Uncharacterized protein (333 aa)
 
 
  0.942
R2601_05313
TRAP dicarboxylate family transporter, DctP subunit (347 aa)
 
   
    0.937
R2601_13314
Probable C4-dicarboxylate transport system, substrate-binding protein (333 aa)
 
  0.921
R2601_06038
C4-dicarboxylate transport system C4-dicarboxylate-binding protein (322 aa)
 
  0.921
R2601_05303
TRAP dicarboxylate transporter, DctM subunit (438 aa)
   
   
 
0.919
R2601_03268
Dicarboxylate transporter DctP subunit family protein (322 aa)
 
  0.907
R2601_05308
TRAP dicarboxylate family transporter, DctQ subunit (186 aa)
 
     
    0.900
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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