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R2601_05433 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_05433" - DNA photolyase-like protein in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_05433DNA photolyase-like protein (401 aa)    
Predicted Functional Partners:
R2601_05438
Putative ubiquinol-cytochrome-c reductase assembly protein (443 aa)
   
        0.868
R2601_12201
Deoxyribodipyrimidine photolyase-related protein (510 aa)
 
     
  0.721
R2601_12231
Putative cyclopropane/cyclopropene fatty acid synthesis protein (262 aa)
 
        0.676
R2601_12243
FAD dependent oxidoreductase (304 aa)
 
        0.643
R2601_17679
Uncharacterized protein (210 aa)
 
      0.575
R2601_12206
Uncharacterized protein (50 aa)
 
          0.539
R2601_27313
Uncharacterized protein (232 aa)
 
   
  0.537
ung
Uracil-DNA glycosylase ; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine (218 aa)
     
 
  0.528
R2601_12226
Cyclopropane-fatty-acyl-phospholipid synthase (390 aa)
 
        0.523
R2601_24759
Uncharacterized protein (289 aa)
   
      0.510
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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