STRINGSTRING
R2601_05478 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_05478" - Cytochrome P450-like protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_05478Cytochrome P450-like protein (432 aa)    
Predicted Functional Partners:
R2601_05473
Glutathione S-transferase (263 aa)
 
          0.964
R2601_05483
Putative peroxidase (569 aa)
        0.929
R2601_21697
Salicylate hydroxylase (392 aa)
   
  0.763
R2601_19397
2-octaprenyl-6-methoxyphenyl hydroxylase (397 aa)
   
  0.763
R2601_11996
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein (417 aa)
   
  0.763
R2601_05333
Phenol 2-monooxygenase (640 aa)
   
  0.763
R2601_14345
Oxidoreductase, Gfo/Idh/MocA family protein (699 aa)
 
  0.705
R2601_04183
Cytochrome P450-like protein (391 aa)
   
          0.700
R2601_17714
Beta-lactamase (297 aa)
   
        0.691
R2601_08306
Iron-sulfur cluster-binding protein (107 aa)
     
  0.674
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (8%) [HD]