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R2601_05533 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_05533" - Transcriptional regulator, GntR family protein in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_05533Transcriptional regulator, GntR family protein (233 aa)    
Predicted Functional Partners:
R2601_05538
Esterase/lipase/thioesterase (303 aa)
              0.866
R2601_05543
ABC sugar transporter, periplasmic binding protein (404 aa)
 
          0.846
R2601_23183
Putative gntR-family transcriptional regulator (221 aa)
   
          0.778
R2601_23086
Probable GntR-family transcriptional regulator (225 aa)
   
          0.777
R2601_01928
Putative transcriptional regulator protein, AsnC/GntR family (241 aa)
   
          0.777
R2601_19412
Transcriptional regulator, GntR family protein (214 aa)
   
          0.774
R2601_00840
Bacterial regulatory proteins, AsnC family-Bacterial regulatory protein, GntR family (235 aa)
   
          0.774
R2601_00685
Bacterial regulatory protein, GntR family (226 aa)
   
          0.774
R2601_04103
Uncharacterized protein (280 aa)
   
          0.773
R2601_13274
Transcriptional regulator, GntR family protein (219 aa)
   
          0.772
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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