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R2601_05778 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_05778" - Transcriptional regulator, GntR family protein in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_05778Transcriptional regulator, GntR family protein (241 aa)    
Predicted Functional Partners:
R2601_23086
Probable GntR-family transcriptional regulator (225 aa)
   
   
  0.787
R2601_00995
Transcriptional regulator, GntR family protein (232 aa)
   
   
  0.787
R2601_19412
Transcriptional regulator, GntR family protein (214 aa)
   
   
  0.780
R2601_23183
Putative gntR-family transcriptional regulator (221 aa)
   
          0.769
R2601_18730
Transcriptional regulator, GntR family protein (230 aa)
   
   
  0.766
R2601_05703
Regulatory protein GntR, HTH (222 aa)
   
          0.764
R2601_04103
Uncharacterized protein (280 aa)
   
          0.760
R2601_25406
Transcriptional regulator, GntR family protein (249 aa)
   
          0.757
R2601_05533
Transcriptional regulator, GntR family protein (233 aa)
   
   
  0.734
R2601_00255
FAD linked oxidase (946 aa)
   
 
  0.733
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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