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R2601_05883 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_05883" - CobW in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_05883CobW (351 aa)    
Predicted Functional Partners:
R2601_05888
Cobaltochelatase (1099 aa)
 
   
  0.984
R2601_05893
CobG (378 aa)
 
     
  0.957
R2601_05903
Precorrin-2 C20-methyltransferase (246 aa)
 
   
  0.954
R2601_05898
Precorrin-8X methylmutase (209 aa)
 
     
  0.941
R2601_05878
Uncharacterized protein (136 aa)
 
          0.932
R2601_05908
Precorrin-3B C17-methyltransferase (248 aa)
 
   
  0.930
R2601_05918
Precorrin-6Y C5,15-methyltransferase (Decarboxylating) (403 aa)
 
     
  0.827
map
Peptidase M ; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed (282 aa)
   
      0.720
R2601_05873
Cob(I)yrinic acid a,c-diamide adenosyltransferase (207 aa)
 
     
  0.700
cobB
Hydrogenobyrinic acid a,c-diamide synthase ; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L-glutamine or ammonia as the nitrogen source (436 aa)
 
     
  0.689
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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