STRINGSTRING
R2601_05888 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_05888" - Cobaltochelatase in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_05888Cobaltochelatase (1099 aa)    
Predicted Functional Partners:
cobB
Hydrogenobyrinic acid a,c-diamide synthase ; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L-glutamine or ammonia as the nitrogen source (436 aa)
 
 
  0.997
R2601_05883
CobW (351 aa)
 
   
  0.984
R2601_05903
Precorrin-2 C20-methyltransferase (246 aa)
 
   
  0.978
R2601_05893
CobG (378 aa)
 
   
  0.977
R2601_11269
ParA family protein (224 aa)
         
    0.977
R2601_05898
Precorrin-8X methylmutase (209 aa)
 
   
  0.976
R2601_05908
Precorrin-3B C17-methyltransferase (248 aa)
 
   
  0.974
R2601_05878
Uncharacterized protein (136 aa)
 
          0.968
R2601_20204
ParA family ATPase (247 aa)
         
    0.955
R2601_05918
Precorrin-6Y C5,15-methyltransferase (Decarboxylating) (403 aa)
 
   
  0.944
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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