STRINGSTRING
R2601_05958 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_05958" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_05958Uncharacterized protein (195 aa)    
Predicted Functional Partners:
R2601_05948
ABC transporter component (216 aa)
 
   
    0.996
R2601_05953
Cobalt transport protein (260 aa)
 
   
    0.996
R2601_05968
Uncharacterized protein (261 aa)
 
   
    0.991
R2601_05963
Cobalamin (Vitamin B12) biosynthesis CbiM protein (203 aa)
          0.990
R2601_24025
Tail fiber protein, putative (1748 aa)
   
          0.598
R2601_22796
Tail fiber protein, putative (2913 aa)
   
          0.519
R2601_26986
Uncharacterized protein (593 aa)
   
          0.471
R2601_20169
Transcriptional regulator (182 aa)
   
          0.449
R2601_25976
Methyltransferase, FkbM family protein (231 aa)
   
          0.447
R2601_15065
Uncharacterized protein (500 aa)
   
          0.420
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (9%) [HD]