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R2601_05963 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_05963" - Cobalamin (Vitamin B12) biosynthesis CbiM protein in Pelagibaca bermudensis
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_05963Cobalamin (Vitamin B12) biosynthesis CbiM protein (203 aa)    
Predicted Functional Partners:
R2601_05953
Cobalt transport protein (260 aa)
 
   
  0.994
R2601_05948
ABC transporter component (216 aa)
 
   
  0.994
R2601_05968
Uncharacterized protein (261 aa)
 
   
    0.994
R2601_05958
Uncharacterized protein (195 aa)
          0.990
R2601_05918
Precorrin-6Y C5,15-methyltransferase (Decarboxylating) (403 aa)
 
   
  0.821
cobQ
Cobyric acid synthase ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation (480 aa)
       
  0.595
R2601_05898
Precorrin-8X methylmutase (209 aa)
       
  0.595
cobD
Cobalamin biosynthesis protein CobD ; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group (311 aa)
         
  0.515
cobS
Cobalamin-5’-phosphate synthase ; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5’-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5’-phosphate (249 aa)
         
  0.515
R2601_05908
Precorrin-3B C17-methyltransferase (248 aa)
         
  0.504
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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